Late blight resistant potato hybrid clones in the VIR collection of plant genetic resources
https://doi.org/10.30901/2227-8834-2018-3-278-292
Abstract
Background. Late blight (LB) causes serious damage to potato crop. The genetic diversity of potato and their wild relatives in the VIR collection served as the basis for creating interspecific hybrids.
Objective of the study. Selection of hybrid potato clones with high and long-term resistance to LB and identification of genotypes that can serve as the most promising sources of new LB resistance genes or new alleles of the already known resistance genes.
Materials and methods. In 2015-2017, 45 hybrid clones with genetic material from two to nine species of Solanum L. section Petota Dumort. and six potato varieties were assessed in field conditions in the Northwestern and Central regions of Russia. The index of plant damage by P. infestans (rAUDPC), relative resistance to LB (Sx) and damage to plants at the end of growth period were determined. Thirty-six genotypes were evaluated in the lab for resistance to highly aggressive P. infestans isolates from the collection of VNIIF (All-Russian Research Institute of Phytopathology). In parallel, DNA markers were used to reveal three genes that confer broad-spectrum resistance to P. infestance (Rpi).
Results and conclusions. The initial period of infection, the rate of pathogen development and the degree of potato crop damage by LB differed significantly in 2015, 2016 and 2017. The relationship between rAUDPC values in different years of study was statistically significant for hybrids and potato varieties (r = 0.87-0.94). Each year, var. 'Sarpo Mira', clones 10 / 05-09 and 50/1 KBA were highly resistant to LB (Sx = 7-8 points). As to other potato genotypes, the values of the Sx index varied between the years of the study. 'Sarpo Mira' and 12 clones, namely 38 KVA, 24-1, 24-2, 16/27-09, 4-1-2012, 118-5-2011, 39-1-2005, 50/1 KBA, 12/1-09, 171-3, 134-2-2006 and 15/13-09 were highly resistant to artificial infection with P. infestans. The average degree of consistency of potato resistance assessments in the field and laboratory experiments was established: the Spearman correlation coefficient r was 0.45-0.50 (p <0.05). In the cluster analysis, 36 potato genotypes were divided into three groups, which differed significantly in their resistance to LB under various environmental conditions. High resistance to LB correlated with the presence of resistance genes that confer broad-spectrum resistance (R8 = Rpi-smira2 in 'Sarpo Mira' and Rpi-blb1, Rpi-blb2 and Rpi-vnt1 in interspecific hybrids).
About the Authors
E. V. RogozinaRussian Federation
42, 44, Bolshaya Morskaya St., St. Petersburg, 190000
N. A. Chalaya
Russian Federation
42, 44, Bolshaya Morskaya St., St. Petersburg, 190000
M. A. Kuznetsova
Russian Federation
5-a, Institute St., Bolshiye Vyazemy Sett., Moscow Province, 143050
V. N. Demidova
Russian Federation
5-a, Institute St., Bolshiye Vyazemy Sett., Moscow Province, 143050
A. N. Rogozin
Russian Federation
5-a, Institute St., Bolshiye Vyazemy Sett., Moscow Province, 143050
T. I. Smetanina
Russian Federation
5-a, Institute St., Bolshiye Vyazemy Sett., Moscow Province, 143050
M. P. Beketova
Russian Federation
42, Timiryazevskaya St., Moscow, 127550
O. A. Fadina
Russian Federation
42, Timiryazevskaya St., Moscow, 127550
E. Е. Khavkin
Russian Federation
42, Timiryazevskaya St., Moscow, 127550
References
1. Colon L. T., Budding D. J., Keizer L.C.P., Pieters J. Components of resistance to late blight (Phytophthora infestans) in eight South American Solanum species // European J. Plant. Pathol., 1995, vol. 101, pp. 441-456.
2. ColonL.,NielsenB,Darsow U. Field test for foliage blight resistance. http://euroblight.net/protocols/ Field test for foliage blight resistance. 2004. http://euroblight.net/fileadmin/euroblight/Protocols/Field_Test_Foliar_Blight_rsvised.pdf.
3. Cooke D. E. L., Cano L. M., Raffaele S., Bain R. A., Cooke L. R. et al. Genome Analyses of an Aggressive and Invasive Lineage of the Irish Potato Famine Pathogen // PLoS Pathog., 2012, vol. 8, no. 10: e1002940. Doi: 10.1371/journal.ppat.1002940.
4. Fadina O.A., BeketovaM. P., Sokolova E. A., KuznetsovaM. A., Smetanina T. I., RogozinaE. V., Khavkin E. E. Anticipatory breeding: molecular markers as a tool in developing donors of potato (Solanum tuberosum L.) late blight resistance from complex interspecific hybrids // Agricultural Biology. 2017, vol.52, no 1, pp. 84-94 [in Russian] Doi: 10.15389/agrobiology.2017.184.rus.
5. Forbes G., Perez W., Andrade Piedra J. Field assessment of resistance in potato to Phytophthora infestans: International cooperators guide. 2014. 35 p. http://cipotato.org/wpcontent/uploads/2014/06/006154.pdf.
6. Fry W. E., Birch P. R. J., Judelson H. S., GrunwaldN. J., Danie G., EvertsK. L., Geven A. J., Gugino B. K., Johnson D. A., Johnson S. B., McGrath M. T., Myers K. L., Ristaino J. B., Roberts P. D., Secor G., Smart C. D. Five reasons to consider Phytophthora infestans a re-emerging pathogen // Phytopathology, 2015, vol. 105, pp. 966-981. http://www.plantpath.cornell.edu/Fry/PHYT0-01-15-0005-FI.pdf.
7. Fry W. E., McGrath M. T., Seaman A., Zitter T. A., McLeod A., Danies G., Small I. M., Myers K., Everts K., Gevens A. J., Gugino B. K., Johnson S. B., Judelson H., Ristaino J., Roberts P., Secor G., Seebold K., Snover-Clift K., Wyenandt A., Grunwald N. J., Smart C. D. The 2009 Late Blight Pandemic in the Eastern United States - Causes and Results // Plant Disease, 2013, vol. 97, no. 3, pp. 296-306.
8. Halterman D.A., Chen Y., Sopee J., Berduo-Sandoval J., Sanchez-Perez A. Competition between Phytophthora infestans effectors leads to increased aggressiveness on plants containing broad-spectrum late blight resistance // PLoS ONE, 2010, vol.5, no. 5: e10536. Doi: 10.1371/journal.pone.0010536.
9. James W. C. An illustrated series of assessment keys for plant diseases, their preparation and usage // Can. Plant Dis. Surv., 1972, vol. 51, pp. 39-65.
10. Jiang R., Li J., Tian Z., Du J., Armstrong M., Baker K., Lim J. T-Y., Vossen J. H., He H., Porta L., Zhou J., Bonierbale M, Hein I., Lindqvist-Kreuze H, Xie C. Potato late blight field resistance from QTL dPI09c is conferred by the NB-LRR gene R8 // Journal of experimental botany, 2018, vol. 69, no. 7, pp. 1545-1555.
11. Kozlov V. A., Rogozina E. V. Interspecific potato hybrid clones developed at VIR as sources of variable traits for potato breeding in Belarus // Proceedings on applied botany, genetics and breeding. St. Petersburg : VIR, 2014, vol. 175, iss. 2, pp. 61-72 [in Russian]
12. Kuznetsova M. A., Spiglasova S. Yu., Rogozhin A. N., Smetanina T. I., Filippov A. V. A new approach to measure potato susceptibility to Phytophthora infestans, a causal organism of the late blight. In: PPO-Special Report (ed. H.T.A.M. Schepers), 2014, no. 16, pp. 223-233. http://euroblight.net/fileadmin/euroblight/Publications/EuroBlight_Proceedings_2014_HR.pdf
13. Kuznetsova M. A., Kozlovsky B. E., Beketova M. P., Sokolova E. A., Malyuchenko O. P., Alekseev Y. I., Rogozina E. V., Khavkin E. E. Phytopathological and molecular characteristics of Phytophthora infestans isolates collected on resistant and susceptible potato genotypes // Mikologiya i fitopatologiya. 2016, vol. 50, pp. 175-184 [in Russian]
14. Kuznetsova M. A., Statsyuk N. V., Rogozhin A. N., Ulanova T. I., Morozova E. V., Demidova V. N. Monitoring of Phytophthora infestans strains isolated from potato and tomato in Moscow Region (2009-2017) // Achievements of Science and Technology in Agro-Industrial Complex. 2018, vol. 32, no3, pp.28-33 [in Russian] Doi:10.24411/0235-2451-2018-10306.
15. Lehsten V., WiikL., HannukkalaA., Andreasson E., Chen D., Ou T. et all. Earlier occurrence and increased explanatory power of climate for the first incidence of potato late blight caused by Phytophthora infestans in Fennoscandia // PLoS ONE. 2017, vol. 12, no. 5: e0177580. https://doi.org/10.1371/journal.pone.0177580.
16. Rogozina E. V. Interspecific potato hybrids are donors of potato resistance to late blight // Reports of the Russian Academy of agricultural sciences. 2003, vol. 2, pp 8-11. [in Russian]
17. Rogozina E. V., Biryukova V. A., SimakovE. A., Zharova V. A., ChalayaN. A., KuznetsovaM. A., Rogozhin A. N., BeketovaM. P., Fadina O. A., Khavkin E. E. Interspecific hybrids as parental lines in anticipatory breeding for potato resistant to disease and pests // Dostizheniya nauki i tekhniki APK. 2018, vol. 32, no. 1, pp. 26-31 [in Russian] Doi: 10.24411/0235-2451-2018-10105.
18. Rogozina E. V., Khavkin E. E. Interspecific potato hybrids as donors of durable resistance to pathogens // Vavilovskii Zhurnal Genetiki i Selektsii - Vavilov Journal of Genetics and Breeding. 2017, vol. 21, no. 1, pp. 30-41 [in Russian] Doi: 10.18699/VJ17.221.
19. Rogozina E. V., Kuznetsova M. A., Patrikeyeva M. V., Spiglazova S. Y., Smetanina T. I., Semenova N. N., Deahl K. L. Late blight-resistant tuber-bearing Solanum species in field and laboratory trials. In: Proceedings of the 12th EuroBlight Workshop (Arras, France May 3-6, 2010), PPO-Special Report (ed. H.T.A.M. Schepers). 2010, no. 14, pp 239-246.
20. RogozinaE. V., KuznetsovaM. A.,Fadina O. A., BeketovaM. P., SokolovaE. A., NovikovaL. Yu.,KhavkinE. E. Stability of late blight resistance of potato hybrids with diverse genetic background // In: Proceedings of the 16th EuroBlight Workshop (Aarhus, Denmark, May 14-17, 2017), PAGV - Special Report (ed. H.T.A.M. Schepers) 2017, no. 18, p. 159-166. http://euroblight.net/fileadmin/euroblight/Workshops/Aarhus/Proceedings/Special_Report_18_Totaal.pdf.
21. Simakov E. A., Zharova V. A., Mityushkin A. V., Biryukova V. A., Rogozina E. V., Kiru S. D. The use of genetic resources to increase the efficiency of potato breeding // Proceedings on applied botany, genetics and breeding. St. Peterburg : VIR, 2017, vol. 177, iss. 2, pp. 113-121 [in Russian]
22. Sokolova Е .А., Kuznetsova M. A., Ulanova T. I., Rogozhin A. N., Smetanina T. I., Demidova V. N., Beketova M. P., Malyuchenko O. P., Alekseev Ya. I., Rogozina E. V., Khavkin E. E. Pathogenicity of East European strains of Phytophthora infestans vs. resistance of colonized potato plants: the profiles of AVR genes vs. R gene pyramids. In: Proceedings of the 16th EuroBlight Workshop (Aarhus, Denmark, May 14-17, 2017), PAGV - Special Report (ed. H.T.A.M. Schepers) 2017, no. 18, pp. 259-267. http://euroblight.net/fileadmin/euroblight/Workshops/AArhus/Proceedings/Special_Report_18_Totaal.pdf
23. Srivastava A. K., Bag T. K., GurjarM. S., Bhardwaj V., Sharma S., Singh B. P. Evaluation of exotic potato genotypes for resistance to late blight //Indian Phytopath. 2015, vol. 68, no. 1, pp. 78-82.
24. Vossen J. K., Jo K.-R., Vosman B. Mining the genus Solanum for increasing disease resistance. In: R. Tuberosa et al., eds. Genomics of Plant Genetic Resources. 2014. Springer Netherlands, pp. 27-46.
25. Yong G. K., Cooke L. R., Kirk W. W., Tumbalam P., Perez F. M., Deahl K. L. Influence of competition and host plant resistance on selection in Phytophthora infestans populations in Michigan // USA and in Northern Ireland Plant Pathology. 2009, vol. 58, pp. 703-714. Doi: 10.1111/j.1365-3059.2009.02043.x.
26. Zimnoch-Guzowska E., FlisB. Evaluation of resistance to Phytophthora infestans: A survey. In: Late Blight: Managing the Global Threat. Hamburg. 2002, pp. 37-47.
Review
For citations:
Rogozina E.V., Chalaya N.A., Kuznetsova M.A., Demidova V.N., Rogozin A.N., Smetanina T.I., Beketova M.P., Fadina O.A., Khavkin E.Е. Late blight resistant potato hybrid clones in the VIR collection of plant genetic resources. Proceedings on applied botany, genetics and breeding. 2018;179(3):278-292. (In Russ.) https://doi.org/10.30901/2227-8834-2018-3-278-292